Sponsored Links:
XDigitize (Popularity:  )
http://www.molgen.mpg.de/~xdigitise/
A visualization software system for evaluation of hybridisation experiments.
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Premier Biosoft International (Popularity: )
http://www.PremierBiosoft.com
Developers of software for real time PCR primer design, TaqMan, molecular beacons, DNA microarray analysis, drawing restriction plasmid maps, gateway ...
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Meta-MEME v2.0.1 (Popularity: )
http://metameme.sdsc.edu/
Software toolkit for building and using motif-based hidden Markov models of DNA and proteins - from the Univ. of California-San ...
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Linux Software Encyclopedia - Bioinformatics (Popularity: )
http://stommel.tamu.edu/~baum/linuxlist/linuxlist/node9.html#biochemistry
Links to Bioinformatics software for Linux. From the Linux Software Encyclopedia.
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Molecular Evolutionary Genetics Analysis (MEGA2) software (Popularity: )
http://megasoftware.net
Provides free downloadable MEGA2 software for use in comparative sequence analysis of genetic data. Program for Win32 platforms.
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Computer Program for Polyphasic Taxonomy Analysis (Popularity: )
http://www.proBiosys.com
The proBiosys suite of programs compares phenetic, chemotaxonomic and nucleic acid sequence data. Algorithms for polyphasic taxonomy are available to ...
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The Sanger Centre: Software (Popularity: )
http://www.sanger.ac.uk/Software/
Production software used at the Sanger Centre, physical mapping software, informatics and analysis software, and data formats
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PubCrawler - An Update Alerting Service for PubMed and GenBank (Popularity: )
http://www.pubcrawler.ie
Software and an online service for periodically performing predefined searches at NCBI, reporting new results by email or on the ...
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Phred/Phrap/Consed System Home Page (Popularity: )
http://www.phrap.org/
basecaller / assembler / sequencer finisher and related tools from the UW Genome Center.
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Artemis: A DNA Sequence Viewer and Annotation Tool (Popularity: )
http://www.sanger.ac.uk/Software/Artemis/
Java program to display a DNA sequence, annotated with features, ORFs. Reads many input formats.
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NCBI BLAST (Popularity: )
http://www.ncbi.nlm.nih.gov/BLAST/
BLAST (Basic Local Alignment Search Tool) is a set of similarity search programs designed to explore all of the available ...
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WU-BLAST Archives (Popularity: )
http://blast.wustl.edu/
WU-BLAST: The Washington University BLAST. "...faster at any sensitivity, more sensitive at any speed, the first BLAST with gapped alignments ...
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GeneRunner for Windows (Popularity: )
http://www.generunner.com
A fairly old sequence analysis tool for everyday lab use. Formerly a commercial product - now "abandonware."
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DNA-Star - Lasergene (Popularity: )
http://www.dnastar.com/
Commercial sequence analysis and manipulation suite for Windows and Macintosh.
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DARWIN (Popularity: )
http://cbrg.inf.ethz.ch/Darwin/index.html
An interactive tool for peptide and nucleotide sequence analysis
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PHRED - Base-Calling Software with Quality Information (Popularity: )
http://www.genome.washington.edu/UWGC/analysistools/Phred.cfm
A widely-used program for calling DNA sequence bases from sequencer trace files.
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GDE for Linux (Popularity: )
http://www.bioafrica.net/GDElinux/index.html
An integrated linux environment for bioinformatics and evolutionary analysis based on the Genetic Data Environment (GDE). Contains binaries for Linux ...
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AcaClone pDRAW32 (Popularity: )
http://www.acaclone.com
Freeware DNA cloning, analysis and visualization software.
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Verbumculus Genetic Sequence Analyzer (Popularity: )
http://www.cs.ucr.edu/~stelo/Verbumculus/
An interesting tool to discover and visualize over- or under-represented words in genetic sequences. Executable for Sparc-Solaris, Sparc-Intel or Linux-Intel. ...
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Metalifesocieties (Popularity: )
http://metalifesocieties.tripod.com/
Makes available various bioinformatics algorithms, which perform all essential tasks in sequence analysis and sequence-based predictions.
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