Related:
Sequence Search
- Sequence
- Dna Sequence
- The Low End Sequence Ep
- Sequence Dancing
Sponsored Links:
The ARB Project (Popularity:  )
(Score: 16.13)
http://www.arb-home.de
A free sequence database application for Unix. It includes a sequence editor, several sequence aligners, phylogeny reconstruction tools, probe/primer search and generation, genome annotation and visualization. In addition to the integrated user-interface ...
Category:
Main\Science\Biology\Bioinformatics\Software
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PIR-International Protein Sequence Database (Popularity: )
(Score: 13.97)
http://pir.georgetown.edu
produces a comprehensive, non-redundant, and expertly annotated protein sequence database. PIR features integrated annotation search to support functional/structural genomics and proteomic research.
Category:
Main\Science\Biology\Bioinformatics\Online Services
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BioTools Incorporated (Popularity: )
(Score: 13.32)
http://www.biotools.com
Provides software tools to accelerate the research process: GeneTool for DNA sequence analysis, PepTool for protein sequence analysis, and ChromaTool for DNA sequence assembly.
Category:
Main\Science\Biology\Bioinformatics\Companies
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NCBI BLAST (Popularity: )
(Score: 12.84)
http://www.ncbi.nlm.nih.gov/BLAST/
BLAST (Basic Local Alignment Search Tool) is a set of similarity search programs designed to explore all of the available sequence databases regardless of whether the query is protein or DNA.
Category:
Main\Science\Biology\Bioinformatics\Software
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Linear Complexity: A Literature Survey (Popularity: )
(Score: 12.46)
http://www.ciphersbyritter.com/RES/LINCOMPL.HTM
The linear complexity (LC) of a sequence is the size in bits of the shortest linear feedback shift register (LFSR) which can produce that sequence. The measure speaks to the difficulty of generating, and perhaps analyzing, a particular sequence.
Category:
Main\Science\Math\Applications\Information Theory
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SA National Bioinformatics Institute (Popularity: )
(Score: 12.40)
http://www.sanbi.ac.za/
SANBI aims to bring genome information, computational biology, and analytical tools to the South African research community. Hosts SA National EMBNet Node, provides links to Sequence Retrieval System (SRS), GeneKraal, and TB Genomes Analysis Server. Research ...
Category:
Main\Science\Biology\Bioinformatics\Online Services
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Sequence Dancing with Diane and Peter (Popularity: )
(Score: 12.28)
http://www.sequencedancing.freeserve.co.uk
All about modern sequence dancing in England. Details of the new dances and links to events and places to dance. Sequence dancing is based on modern ballroom dancing and very popular.
Category:
Main\Arts\Performing Arts\Dance\Ballroom
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HIV Sequence Database (Popularity: )
(Score: 11.81)
http://www.hiv.lanl.gov:80/content/index
Collection HIV and related genetic sequence data and computer analyses - from the Los Alamos Natl. Lab.
Category:
Main\Science\Biology\Microbiology\Virology
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Metalifesocieties (Popularity: )
(Score: 11.76)
http://metalifesocieties.tripod.com/
Makes available various bioinformatics algorithms, which perform all essential tasks in sequence analysis and sequence-based predictions.
Category:
Main\Science\Biology\Bioinformatics\Software
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Artemis: A DNA Sequence Viewer and Annotation Tool (Popularity: )
(Score: 11.55)
http://www.sanger.ac.uk/Software/Artemis/
Java program to display a DNA sequence, annotated with features, ORFs. Reads many input formats.
Category:
Main\Science\Biology\Bioinformatics\Software
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BLAST (Popularity: )
(Score: 11.53)
http://www.ncbi.nlm.nih.gov/BLAST/
NCBI's sequence similarity search tool designed to support analysis of nucleotide and protein databases.
Category:
Main\Science\Biology\Bioinformatics\Online Services
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Mascot (Popularity: )
(Score: 11.53)
http://www.matrixscience.com/search_form_select.html
Search engine that uses mass spectrometry peptide data to identify proteins from primary sequence databases.
Category:
Main\Science\Biology\Bioinformatics\Online Services
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3D-PSSM Fold Recognition (Popularity: )
(Score: 11.48)
http://www.sbg.bio.ic.ac.uk/~3dpssm/
Combines sequence and structural information for predicting the structure and/or function of your protein sequence, and can detect remote homologies beyond PSI-Blast.
Category:
Main\Science\Biology\Bioinformatics\Online Services
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AlgoNomics (Popularity: )
(Score: 11.48)
http://www.algonomics.com
Provides online, as well as on-site, tools for protein sequence analysis and structure prediction. Focused on the relationship between the amino acid sequence of proteins and their function.
Category:
Main\Science\Biology\Bioinformatics\Companies
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Sequence V1.5 (Popularity: )
(Score: 11.48)
http://www.kombyonyx.com
A program for high throughput mass spectrometric sequence determination of linear and cyclic peptides originating from split-and-pool combinatorial libraries.
Category:
Main\Science\Chemistry\Analytical\Software
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On-Line Encyclopedia of Integer Sequences (Popularity: )
(Score: 11.48)
http://www.research.att.com/~njas/sequences/
Identify a sequence by entering few terms in the sequence. Additional information includes examples, formulas, and related links.
Category:
Main\Science\Math\Reference
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GeneStream II (Popularity: )
(Score: 11.41)
http://xylian.igh.cnrs.fr/
Sequence comparision and search programs, including the rigorous Smith-Waterman algorithm (in FastA and Ssearch) - from the IGH, Montpellier FR.
Category:
Main\Science\Biology\Bioinformatics\Online Services
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The Protein Information Resource (Popularity: )
(Score: 11.40)
http://pir.georgetown.edu
In collaboration with the Munich Information Center for Protein Sequences (MIPS) and the Japanese International Protein Sequence Database (JIPID) maintains the PIR-International Protein Sequence Database --- a comprehensive, annotated, and non-redundant ...
Category:
Main\Science\Biology\Bioinformatics\Online Services
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Sequence Alignment and Modeling System (Popularity: )
(Score: 11.32)
http://www.cse.ucsc.edu/research/compbio/sam.html
Implementation of hidden Markov models for sequence analysis. Free UNIX software for nonprofit groups, and sequences can be submitted online.
Category:
Main\Science\Biology\Bioinformatics\Online Services
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RRNDB (Popularity: )
(Score: 11.19)
http://rrndb.cme.msu.edu/
Database of over 300 operons, including 77 from whole genome sequence projects, enabling search through the phylogenetic distribution from the Center for Microbial Ecology at MSU, Lansing, MI.
Category:
Main\Science\Biology\Biochemistry and Molecular Biology\Biomolecules
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NetNglyc (Popularity: )
(Score: 11.15)
http://www.cbs.dtu.dk/services/NetNGlyc/
N-glycosylation site prediction in human proteins using artificial neural networks that examine the sequence context of Asn-Xaa-Ser/Thr sequons, from Center for Biological Sequence Analysis, Technical University of Denmark.
Category:
Main\Science\Biology\Biochemistry and Molecular Biology\Biomolecules
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Sight (Popularity: )
(Score: 11.14)
http://bioinformatics.org/jSight/
Extendable parallel system for automatic genome analysis. Software for analysing all potential genes in a defined genome region. Given two marker names, can output reports of genomic features between them. Features for converting between naming systems ...
Category:
Main\Science\Biology\Bioinformatics\Software
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Genetic Code (Popularity: )
(Score: 11.10)
http://en.wikipedia.org/wiki/Genetic_code
Wikipedia article on the relationship between the nucleic acid base sequence and the corresponding polypeptide amino acid sequence.
Category:
Main\Science\Biology\Biochemistry and Molecular Biology\Gene Expression
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Metalife AG (Popularity: )
(Score: 11.10)
http://metalife.orbitel.bg
Developing bioinformatics software for sequence analysis, sequence based predictions, and biological pathway analysis and visualization.
Category:
Main\Science\Biology\Bioinformatics\Companies
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Sequence Analysis for Mac OS X (Popularity: )
(Score: 11.09)
http://www.informagen.com/SA/
A freeware Mac OS X application written in Java that does many standard types of DNA and protein sequence analysis tasks.
Category:
Main\Science\Biology\Bioinformatics\Software
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Transterm - a database of mRNA regions and motifs (Popularity: )
(Score: 11.05)
http://uther.otago.ac.nz/Transterm.html
Transterm - an interactive database of mRNA regions and motifs from all species and genomes. Users can browse the pre-computed data tables, search the sequence databases or search their own sequences.
Category:
Main\Science\Biology\Bioinformatics\Online Services
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The Nautilus Spiral - A Sequence of Triangles (Popularity: )
(Score: 11.03)
http://www.theoldpro.net/ms/nautilusproblem
Studying the expanding sequence of isosceles right triangles utilizing recursive and explicit functions. With diagrams, explanations, and tables.
Category:
Main\Science\Math\Education\Precalculus
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University of South Carolina Sequence Stratigraphy Web (Popularity: )
(Score: 10.99)
http://strata.geol.sc.edu/
Gateway to the USC's web site on sequence stratigraphy.
Category:
Main\Science\Earth Sciences\Geology\Rocks and Minerals
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Sequence Analysis (Bielefeld University Bioinformatics Server) (Popularity: )
(Score: 10.99)
http://bibiserv.techfak.uni-bielefeld.de/intro/seqdept.html
Collection of sequence analysis tools.
Category:
Main\Science\Biology\Bioinformatics\Online Services
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Center for Biological Sequence Analysis (Popularity: )
(Score: 10.98)
http://www.cbs.dtu.dk/
CBS conducts research on cellular information processing, relations between sequence composition, the content and order of macromolecular structure and function. Part of the Technical University of Denmark in Copenhagen.
Category:
Main\Science\Biology\Biochemistry and Molecular Biology\Biomolecules
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The Helio Sequence (Popularity: )
(Score: 10.90)
http://users.skynet.be/entrepot/rev/h/helio2.html
Brief review of "Com Plex", a 2000 release by Cavity Search Records. [English/Dutch]
Category:
Main\Arts\Music\Bands and Artists\H
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Hanah Margalit's Bioinformatics Lab (Popularity: )
(Score: 10.83)
http://bioinfo.md.huji.ac.il/marg/
An Israeli lab focussing on: determination of T-cell epitopes along a protein sequence, protein-DNA interaction in transcription regulation, genome-scale analysis, sequence-structure relationship.
Category:
Main\Science\Biology\Bioinformatics\Research Groups
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TRANSFAC-The Transcription Factor Database (Popularity: )
(Score: 10.76)
http://www.gene-regulation.com/pub/databases.html#transfac
Very thorough compilation of transcriptional regulatory protein factors & their cognate gene promoter elements along with DNA sequence search & analysis programs - from GBF, Braunschweig, Germany.
Category:
Main\Science\Biology\Bioinformatics\Online Services
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Genome Sequencing Center - Washington University Medical School (Popularity: )
(Score: 10.72)
http://genome.wustl.edu/
Focuses on the large scale generation and analysis of DNA sequence. Features databases, clone libraries, and sequence data for a range of genomes including human, mouse, and C.elegans.
Category:
Main\Science\Biology\Genetics\Research Centers
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AnnHyb - Nucleotidic Sequence Manager (Popularity: )
(Score: 10.72)
http://bioinformatics.org/annhyb/
Free software for working with and managing nucleotide sequences in multiple formats. Many features including sequence annotation, restriction analysis, pattern searching, retrieval from servers. Released under GNU Public Licence.
Category:
Main\Science\Biology\Bioinformatics\Software
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Berkeley Drosophila Genome Project (Popularity: )
(Score: 10.55)
http://www.fruitfly.org/
Sequence of the euchromatic genome of drosophila melanogaster and to generate and maintain biological annotations of this sequence. Includes databases, tools, and publications.
Category:
Main\Reference\Education\Colleges and Universities\North America
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Berkeley Drosophila Genome Project (Popularity: )
(Score: 10.55)
http://www.fruitfly.org/
Sequence of the euchromatic genome of drosophila melanogaster and to generate and maintain biological annotations of this sequence. Includes databases, tools, and publications.
Category:
Main\Science\Biology\Genetics\Eukaryotic
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Story of the Trojan War - The Sequence of Events [About.com] (Popularity: )
(Score: 10.54)
http://ancienthistory.about.com/library/weekly/aa011503a.htm
The sequence of major events in the Trojan War and The Iliad of Homer beginning with the theft, by Paris, of Helen of Troy.
Category:
Main\Arts\Literature\Myths and Folktales\Myths
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Searchy (Popularity: )
(Score: 10.54)
http://www.searchy.com/
Queries major search engines and serves the results in a sequence of 10 per source in the default setting. Advanced options include combined results and choice of engine.
Category:
Main\Computers\Internet\Searching\Metasearch
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UGA Stratigraphy Lab (Popularity: )
(Score: 10.53)
http://www.uga.edu/strata/
Includes an online tutorial about sequence stratigraphy, information about Ordovician sequence stratigraphy, and software.
Category:
Main\Science\Earth Sciences\Geology\Rocks and Minerals
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