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sequence design
Related: Sequence - Dna Sequence - The Low End Sequence Ep - Sequence Dancing - Sequence Analysis

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BioTools Incorporated (Popularity: ) (Score: 13.32)
http://www.biotools.com
Provides software tools to accelerate the research process: GeneTool for DNA sequence analysis, PepTool for protein sequence analysis, and ChromaTool for DNA sequence assembly.
Category:   Main\Science\Biology\Bioinformatics\Companies

The ARB Project (Popularity: ) (Score: 12.65)
http://www.arb-home.de
A free sequence database application for Unix. It includes a sequence editor, several sequence aligners, phylogeny reconstruction tools, probe/primer search and generation, genome annotation and visualization. In addition to the integrated user-interface ...
Category:   Main\Science\Biology\Bioinformatics\Software

Linear Complexity: A Literature Survey (Popularity: ) (Score: 12.46)
http://www.ciphersbyritter.com/RES/LINCOMPL.HTM
The linear complexity (LC) of a sequence is the size in bits of the shortest linear feedback shift register (LFSR) which can produce that sequence. The measure speaks to the difficulty of generating, and perhaps analyzing, a particular sequence.
Category:   Main\Science\Math\Applications\Information Theory

Sequence Dancing with Diane and Peter (Popularity: ) (Score: 12.28)
http://www.sequencedancing.freeserve.co.uk
All about modern sequence dancing in England. Details of the new dances and links to events and places to dance. Sequence dancing is based on modern ballroom dancing and very popular.
Category:   Main\Arts\Performing Arts\Dance\Ballroom

HIV Sequence Database (Popularity: ) (Score: 11.81)
http://www.hiv.lanl.gov:80/content/index
Collection HIV and related genetic sequence data and computer analyses - from the Los Alamos Natl. Lab.
Category:   Main\Science\Biology\Microbiology\Virology

Metalifesocieties (Popularity: ) (Score: 11.76)
http://metalifesocieties.tripod.com/
Makes available various bioinformatics algorithms, which perform all essential tasks in sequence analysis and sequence-based predictions.
Category:   Main\Science\Biology\Bioinformatics\Software

Artemis: A DNA Sequence Viewer and Annotation Tool (Popularity: ) (Score: 11.55)
http://www.sanger.ac.uk/Software/Artemis/
Java program to display a DNA sequence, annotated with features, ORFs. Reads many input formats.
Category:   Main\Science\Biology\Bioinformatics\Software

Sequence V1.5 (Popularity: ) (Score: 11.48)
http://www.kombyonyx.com
A program for high throughput mass spectrometric sequence determination of linear and cyclic peptides originating from split-and-pool combinatorial libraries.
Category:   Main\Science\Chemistry\Analytical\Software

3D-PSSM Fold Recognition (Popularity: ) (Score: 11.48)
http://www.sbg.bio.ic.ac.uk/~3dpssm/
Combines sequence and structural information for predicting the structure and/or function of your protein sequence, and can detect remote homologies beyond PSI-Blast.
Category:   Main\Science\Biology\Bioinformatics\Online Services

AlgoNomics (Popularity: ) (Score: 11.48)
http://www.algonomics.com
Provides online, as well as on-site, tools for protein sequence analysis and structure prediction. Focused on the relationship between the amino acid sequence of proteins and their function.
Category:   Main\Science\Biology\Bioinformatics\Companies

On-Line Encyclopedia of Integer Sequences (Popularity: ) (Score: 11.48)
http://www.research.att.com/~njas/sequences/
Identify a sequence by entering few terms in the sequence. Additional information includes examples, formulas, and related links.
Category:   Main\Science\Math\Reference

The Protein Information Resource (Popularity: ) (Score: 11.40)
http://pir.georgetown.edu
In collaboration with the Munich Information Center for Protein Sequences (MIPS) and the Japanese International Protein Sequence Database (JIPID) maintains the PIR-International Protein Sequence Database --- a comprehensive, annotated, and non-redundant ...
Category:   Main\Science\Biology\Bioinformatics\Online Services

Sequence Alignment and Modeling System (Popularity: ) (Score: 11.32)
http://www.cse.ucsc.edu/research/compbio/sam.html
Implementation of hidden Markov models for sequence analysis. Free UNIX software for nonprofit groups, and sequences can be submitted online.
Category:   Main\Science\Biology\Bioinformatics\Online Services

NetNglyc (Popularity: ) (Score: 11.15)
http://www.cbs.dtu.dk/services/NetNGlyc/
N-glycosylation site prediction in human proteins using artificial neural networks that examine the sequence context of Asn-Xaa-Ser/Thr sequons, from Center for Biological Sequence Analysis, Technical University of Denmark.
Category:   Main\Science\Biology\Biochemistry and Molecular Biology\Biomolecules

Genetic Code (Popularity: ) (Score: 11.10)
http://en.wikipedia.org/wiki/Genetic_code
Wikipedia article on the relationship between the nucleic acid base sequence and the corresponding polypeptide amino acid sequence.
Category:   Main\Science\Biology\Biochemistry and Molecular Biology\Gene Expression

Metalife AG (Popularity: ) (Score: 11.10)
http://metalife.orbitel.bg
Developing bioinformatics software for sequence analysis, sequence based predictions, and biological pathway analysis and visualization.
Category:   Main\Science\Biology\Bioinformatics\Companies

Sequence Analysis for Mac OS X (Popularity: ) (Score: 11.09)
http://www.informagen.com/SA/
A freeware Mac OS X application written in Java that does many standard types of DNA and protein sequence analysis tasks.
Category:   Main\Science\Biology\Bioinformatics\Software

The Nautilus Spiral - A Sequence of Triangles (Popularity: ) (Score: 11.03)
http://www.theoldpro.net/ms/nautilusproblem
Studying the expanding sequence of isosceles right triangles utilizing recursive and explicit functions. With diagrams, explanations, and tables.
Category:   Main\Science\Math\Education\Precalculus

Sequence Analysis (Bielefeld University Bioinformatics Server) (Popularity: ) (Score: 10.99)
http://bibiserv.techfak.uni-bielefeld.de/intro/seqdept.html
Collection of sequence analysis tools.
Category:   Main\Science\Biology\Bioinformatics\Online Services

University of South Carolina Sequence Stratigraphy Web (Popularity: ) (Score: 10.99)
http://strata.geol.sc.edu/
Gateway to the USC's web site on sequence stratigraphy.
Category:   Main\Science\Earth Sciences\Geology\Rocks and Minerals

Center for Biological Sequence Analysis (Popularity: ) (Score: 10.98)
http://www.cbs.dtu.dk/
CBS conducts research on cellular information processing, relations between sequence composition, the content and order of macromolecular structure and function. Part of the Technical University of Denmark in Copenhagen.
Category:   Main\Science\Biology\Biochemistry and Molecular Biology\Biomolecules

Hanah Margalit's Bioinformatics Lab (Popularity: ) (Score: 10.83)
http://bioinfo.md.huji.ac.il/marg/
An Israeli lab focussing on: determination of T-cell epitopes along a protein sequence, protein-DNA interaction in transcription regulation, genome-scale analysis, sequence-structure relationship.
Category:   Main\Science\Biology\Bioinformatics\Research Groups

AnnHyb - Nucleotidic Sequence Manager (Popularity: ) (Score: 10.72)
http://bioinformatics.org/annhyb/
Free software for working with and managing nucleotide sequences in multiple formats. Many features including sequence annotation, restriction analysis, pattern searching, retrieval from servers. Released under GNU Public Licence.
Category:   Main\Science\Biology\Bioinformatics\Software

Genome Sequencing Center - Washington University Medical School (Popularity: ) (Score: 10.72)
http://genome.wustl.edu/
Focuses on the large scale generation and analysis of DNA sequence. Features databases, clone libraries, and sequence data for a range of genomes including human, mouse, and C.elegans.
Category:   Main\Science\Biology\Genetics\Research Centers

Boeing (Popularity: ) (Score: 10.66)
http://www.boeing.com/defense-space/space/spacestation/index.html
Features the prime contractor's overview of the design, its assembly sequence in space and scientific use.
Category:   Main\Science\Technology\Space\International Space Station

Berkeley Drosophila Genome Project (Popularity: ) (Score: 10.55)
http://www.fruitfly.org/
Sequence of the euchromatic genome of drosophila melanogaster and to generate and maintain biological annotations of this sequence. Includes databases, tools, and publications.
Category:   Main\Reference\Education\Colleges and Universities\North America

Berkeley Drosophila Genome Project (Popularity: ) (Score: 10.55)
http://www.fruitfly.org/
Sequence of the euchromatic genome of drosophila melanogaster and to generate and maintain biological annotations of this sequence. Includes databases, tools, and publications.
Category:   Main\Science\Biology\Genetics\Eukaryotic

Story of the Trojan War - The Sequence of Events [About.com] (Popularity: ) (Score: 10.54)
http://ancienthistory.about.com/library/weekly/aa011503a.htm
The sequence of major events in the Trojan War and The Iliad of Homer beginning with the theft, by Paris, of Helen of Troy.
Category:   Main\Arts\Literature\Myths and Folktales\Myths

UGA Stratigraphy Lab (Popularity: ) (Score: 10.53)
http://www.uga.edu/strata/
Includes an online tutorial about sequence stratigraphy, information about Ordovician sequence stratigraphy, and software.
Category:   Main\Science\Earth Sciences\Geology\Rocks and Minerals

Nematode Net (Popularity: ) (Score: 10.46)
http://www.nematode.net/
Project at Washington University to sequence parasitic nematodes of humans, animals, and plants. Provides access to new gene sequence information, tools for analyzing nematode sequences, and brief information and photos of the species.
Category:   Main\Science\Biology\Genetics\Eukaryotic

Entelechon Backtranslation tool (Popularity: ) (Score: 10.46)
http://www.entelechon.com/eng/backtranslation.html
Online backtranslation tool for translating a protein sequence into a DNA sequence. The codon usage can be downloaded from a database and adjusted manually for each amino acid, if required. Java applet.
Category:   Main\Science\Biology\Bioinformatics\Online Services

In Sequence (Popularity: ) (Score: 10.45)
http://www.insequence.org/
Weblog by Teresa Ortega, on comic books, animation, video games, graphic arts and design.
Category:   Main\Arts\Comics\Magazines and E-zines

PIR-International Protein Sequence Database (Popularity: ) (Score: 10.41)
http://pir.georgetown.edu
produces a comprehensive, non-redundant, and expertly annotated protein sequence database. PIR features integrated annotation search to support functional/structural genomics and proteomic research.
Category:   Main\Science\Biology\Bioinformatics\Online Services

Molecular Biology Unit (Popularity: ) (Score: 10.13)
http://www.ncl.ac.uk/mbu/
Information about the unit and the services it provides including: Edman Protein Sequence Analysis, Automated DNA Sequence Analysis, Custom Peptide Synthesis and Oligonucleotide Primer Synthesis.
Category:   Main\Reference\Education\Colleges and Universities\Europe

The Mangarevan Sequence and Dating of the Geographic Expansion into Southeast Polynesia (Popularity: ) (Score: 10.04)
http://muse.jhu.edu/journals/asian_perspectives/v041/41.2green.pdf
Asian Perspectives 41(2). A recently published archaeological sequence supported by information from six sites excavated in the Mangarevan group in 1959 is summarized in the context of additional data and current interpretations of the prehistory of southeastern ...
Category:   Main\Science\Social Sciences\Archaeology\Regional

Maurer, Dieter - Python Projects (Popularity: ) (Score: 10.01)
http://www.handshake.de/~dieter/pyprojects/
where.py - returns information about the sequence of calls leading to the calling function in the form of a sequence of tuples (function,file,lineno), PyAudioCD for Linux, TreeWidget, PyXPath, WeakDicts - addressing CPython's problems with cyclic references ...
Category:   Main\Computers\Programming\Languages\Python

The Vienna RNA Package (Popularity: ) (Score: 9.82)
http://www.tbi.univie.ac.at/~ivo/RNA
A free suit of software for the analysis of RNA secondary structure, including structure prediction and comparison as well as sequence design.
Category:   Main\Science\Biology\Biochemistry and Molecular Biology\Biomolecules

GUIdeLA: Constraint Language and System for Constructing Graphical User Interfaces (Popularity: ) (Score: 9.66)
http://www.icot.or.jp/ARCHIVE/Museum/FUNDING/97/plan22.html
Building a user-friendly Graphical User Interface (GUI) with languages like C++ or Java is difficult and time-consuming, because such languages demand specifying many details about the geometric data of layout, the sequence in which items are displayed ...
Category:   Main\Computers\Programming\Languages\Constraint

Decodeine.Choreography of Digital Space (Popularity: ) (Score: 9.50)
http://www.decodeine.org
Dynamics, Simulation and Animation design processes in architecture. The Pathology of Space. Time sequence, palimpsest and space.
Category:   Main\Arts\Architecture\Media\Magazines and E-zines

SA National Bioinformatics Institute (Popularity: ) (Score: 9.24)
http://www.sanbi.ac.za/
SANBI aims to bring genome information, computational biology, and analytical tools to the South African research community. Hosts SA National EMBNet Node, provides links to Sequence Retrieval System (SRS), GeneKraal, and TB Genomes Analysis Server. Research ...
Category:   Main\Science\Biology\Bioinformatics\Online Services

 
 
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